Kernel-based Conditional Independence Test and Application in Causal Discovery

نویسندگان

  • Kun Zhang
  • Jonas Peters
  • Dominik Janzing
  • Bernhard Schölkopf
چکیده

Conditional independence testing is an important problem, especially in Bayesian network learning and causal discovery. Due to the curse of dimensionality the case of continuous variables is particularly challenging. We propose a Kernel-based Conditional Independence test (KCI-test), by constructing an appropriate test statistic and deriving its asymptotic distribution under the null hypothesis of conditional independence. The proposed method is computationally relatively efficient and easy to implement. Experimental results show that it outperforms other methods, especially when the conditioning set is large or the sample size is not very large, in which case other methods encounter difficulties.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Conditional independence testing based on a nearest-neighbor estimator of conditional mutual information

Conditional independence testing is a fundamental problem underlying causal discovery and a particularly challenging task in the presence of nonlinear and high-dimensional dependencies. Here a fully non-parametric test for continuous data based on conditional mutual information combined with a local permutation scheme is presented. Through a nearest neighbor approach, the test efficiently adapt...

متن کامل

Insensitivity of Constraint-Based Causal Discovery Algorithms to Violations of the Assumption of Multivariate Normality

Constraint-based causal discovery algorithms, such as the PC algorithm, rely on conditional independence tests and are otherwise independent of the actual distribution of the data. In case of continuous variables, the most popular conditional independence test used in practice is the partial correlation test, applicable to variables that are multivariate Normal. Many researchers assume multivar...

متن کامل

A Permutation-Based Kernel Conditional Independence Test

Determining conditional independence (CI) relationships between random variables is a challenging but important task for problems such as Bayesian network learning and causal discovery. We propose a new kernel CI test that uses a single, learned permutation to convert the CI test problem into an easier two-sample test problem. The learned permutation leaves the joint distribution unchanged if a...

متن کامل

Self-Discrepancy Conditional Independence Test

Tests of conditional independence (CI) of random variables play an important role in machine learning and causal inference. Of particular interest are kernel-based CI tests which allow us to test for independence among random variables with complex distribution functions. The efficacy of a CI test is measured in terms of its power and its calibratedness. We show that the Kernel CI Permutation T...

متن کامل

A Kernel Conditional Independence Test for Relational Data

Conditional independence (CI) tests play a central role in statistical inference, machine learning, and causal discovery. Most existing CI tests assume that the samples are independently and identically distributed (i.i.d.). However, this assumption often does not hold in the case of relational data. We define Relational Conditional Independence (RCI), a generalization of CI to the relational s...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2011